PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G17440.1   Transcription initiation factor TFIID subunit A

Lab Annot.
Mapman: 27.2 RNA.transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G17440.2 11Arabidopsis thaliana06831001000 (0)C
AT3G10070.1 11Arabidopsis thaliana2E-3537533480 (0)C
Os01g62820.3 7Oryza sativa2E-8050744560 (0)C
Os01g62820.2 7Oryza sativa2E-8050744560 (0)C
Os01g62820.1 7Oryza sativa1E-7950744560 (0)C
Zm00001eb148060_P001 agpv5Zea mays2E-5317754700 (0)C
Zm00001eb148060_P003 agpv5Zea mays2E-5317754700 (0)C
Zm00001eb148060_P005 agpv5Zea mays3E-5317754700 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CBFD_NFYB_HMF(2) TFIID_20kDa(2)
TargetP: Chloroplast (Class 2 C0.938; M0.012; S0.003; _0.211)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 683 aa (-cTP 627)
Molecular Weight 74.81 kDA(-cTP 69.16)
PI 9.84(-cTP 9.95)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help