PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G17200.1   Uncharacterized protein family (UPF0497)
Lab Annot. Uncharacterised protein family (UPF0497)
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G17200.2 11Arabidopsis thaliana5E-761101001000 (0)S
AT3G14380.1 11Arabidopsis thaliana6E-5515857730 (0)_
AT5G54980.1 11Arabidopsis thaliana6E-2317033610 (0)_
Os04g21320.1 7Oryza sativa8E-69173587511 (11)_
Os04g21320.3 7Oryza sativa2E-5917354695 (5)_
Os02g12760.1 7Oryza sativa3E-3216939600 (0)_
Zm00001eb087050_P001 agpv5Zea mays4E-5117454760 (0)_
GRMZM2G126586_P01 3.21Zea mays8E-4417353740 (0)M
v1_GRMZM2G126586_P01 4a53Zea mays8E-4417353740 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF588(1) MARVEL(1)
TargetP: Cytoplasm (Class 1 C0.044; M0.054; S0.047; _0.983)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 4 TMs
TAT position:
Length 204 aa (-cTP 195)
Molecular Weight 21.88 kDA(-cTP )
PI 5.50(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help