PPDB

 The Plant Proteome Database

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AT1G17160.1   pfkB-like carbohydrate kinase family protein
Lab Annot. PfkB family ribosekinase RBSK (produces ribose5P)
Mapman: 3.5 minor CHO metabolism.others
Curated Location plastid stroma (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G17160.2 11Arabidopsis thaliana034810010037 (35)C
AT1G06030.1 11Arabidopsis thaliana7E-17324304516 (9)_
AT1G06020.1 11Arabidopsis thaliana2E-1629930457 (7)_
Os01g47550.1 7Oryza sativa9E-156307708322 (22)C
Os01g66940.1 7Oryza sativa4E-18300294654 (54)S
Os04g43750.2 7Oryza sativa1E-11309244145 (45)_
Zm00001eb359730_P001 agpv5Zea mays7E-15330769840 (0)M
Zm00001eb359730_P002 agpv5Zea mays7E-15330769840 (0)M
GRMZM2G007630_P01 3.21Zea mays3E-58152617827 (27)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Carb_kinase(1) Kelch_2(2) PfkB(1) Phos_pyr_kin(1)
TargetP: Chloroplast (Class 1 C0.920; M0.022; S0.012; _0.068)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 379 aa (-cTP 305) (-lTP 300)
Molecular Weight 40.19 kDA(-cTP 32.09)(-lTP 31.68)
PI 6.12(-cTP 5.23)(-lTP 5.246)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
151Detail       leaf [A. thaliana] chloroplast stromawild-type
303Detail       leaf [A. thaliana] chloroplast stromawild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
869Detail       leaf [A. thaliana] chloroplast stromawild-type
870Detail       leaf [A. thaliana] chloroplast stromawild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1458Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 1)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1481Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1483Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 2)
1484Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 2)
1485Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1541Detail       leaf [A. thaliana] Thylakoids plastoglobuleM-48
1542Detail       leaf [A. thaliana] wild-type
1941Detail       leaf [A. thaliana] stroma WT stromawild-type
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1943Detail       leaf [A. thaliana] stroma WT stromawild-type
1944Detail       leaf [A. thaliana] stroma UVR stromaUVR
1945Detail       leaf [A. thaliana] stroma UVR stromaUVR
1946Detail       leaf [A. thaliana] stroma UVR stromawild-type
1947Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1948Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1949Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1985Detail       leaf [A. thaliana] plastid wild-type
1987Detail       leaf [A. thaliana] plastid Prep1_Prep2
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2
2112Detail       leaf [A. thaliana] Stroma stromawt
2113Detail       leaf [A. thaliana] Stroma stromawt
2114Detail       leaf [A. thaliana] Stroma stromawt
2115Detail       leaf [A. thaliana] Stroma stromacGep
2312Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2316Detail       leaf [A. thaliana] PG plastoglobule 
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 16207701(chloroplast stroma)
18431481(chloroplast)
19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
20423899(chloroplast)
19888209(80S polysomal fraction)
19995723(chloroplast reference proteome)
21173025(root proteome)

Comparative Proteomics Data

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