PPDB

PPDB	The Plant Proteome Database

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AT1G17145.1 RING/U-box superfamily protein

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G17145.2 11 Arabidopsis thaliana 0 335 89 89 0 (0) _
AT1G78420.1 11 Arabidopsis thaliana 5E-131 332 62 75 0 (0) _
AT1G78420.2 11 Arabidopsis thaliana 5E-131 332 62 75 0 (0) _
Os02g14720.1 7 Oryza sativa 1E-86 378 43 59 0 (0) _
Os02g14720.2 7 Oryza sativa 9E-85 378 43 60 0 (0) _
Os06g06120.1 7 Oryza sativa 5E-79 238 52 72 0 (0) M
v1_GRMZM2G105909_P01 4a53 Zea mays 4E-88 282 51 69 0 (0) M
GRMZM2G105909_P01 3.21 Zea mays 4E-88 282 51 69 0 (0) M
Zm00001eb376630_P001 agpv5 Zea mays 4E-88 282 51 69 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FYDLN_acid(1) Prok-RING_4(2) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-RING_2(1
TargetP:	Cytoplasm (Class 4 C0.012; M0.518; S0.023; _0.872)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	335 aa (-cTP 258)
Molecular Weight	37.70 kDA(-cTP )
PI	4.86(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1710	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	Wild-type
1713	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	k1k3

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data