PPDB

PPDB	The Plant Proteome Database

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AT1G17070.1 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein

Lab Annot.

D111/G-patch domain-containing protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G42330.3 11 Arabidopsis thaliana 0 818 61 71 0 (0) _
AT2G42330.1 11 Arabidopsis thaliana 0 818 61 71 4 (0) _
AT2G42330.2 11 Arabidopsis thaliana 0 818 61 71 4 (0) _
Os12g42140.1 7 Oryza sativa 0 693 48 64 0 (0) _
Os01g41670.1 7 Oryza sativa 3E-43 348 31 51 0 (0) _
Os04g43324.1 7 Oryza sativa 2E-35 336 31 48 0 (0) _
Zm00001eb135930_P001 agpv5 Zea mays 0 872 44 60 0 (0) _
v1_GRMZM2G114584_P03 4a53 Zea mays 0 872 44 60 39 (39) _
GRMZM2G114584_P03 3.21 Zea mays 0 872 44 60 34 (34) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	G-patch(1) G-patch_2(1) GCFC(1) TIP_N(2)
TargetP:	Cytoplasm (Class 2 C0.145; M0.113; S0.085; _0.909)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	849 aa (-cTP 763)
Molecular Weight	96.88 kDA(-cTP )
PI	5.53(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
352	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
1410	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data