PPDB

The Plant Proteome Database

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AT1G17020.1   senescence-related gene 1

Lab Annot.
Mapman: 16.8.4 secondary metabolism.flavonoids.flavonols
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G17010.1 11Arabidopsis thaliana035977870 (0)_
AT4G25300.1 11Arabidopsis thaliana035874880 (0)_
AT4G25310.1 11Arabidopsis thaliana035974860 (0)_
Os01g24980.1 7Oryza sativa2E-10734745640 (0)_
Os10g41020.1 7Oryza sativa1E-10533046670 (0)_
Os10g40934.2 7Oryza sativa1E-10135644640 (0)_
Zm00001eb210490_P001 agpv5Zea mays4E-10336542620 (0)_
AC190636.3_FGP005 3.21Zea mays4E-10336542620 (0)_
v1_AC190636.3_FGP005 4a53Zea mays4E-10336542620 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 2OG-FeII_Oxy(1) DIOX_N(1)
TargetP: Cytoplasm (Class 4 C0.178; M0.133; S0.320; _0.626)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 358 aa (-cTP 341)
Molecular Weight 41.04 kDA(-cTP )
PI 5.30(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1541Detail       leaf [A. thaliana] Thylakoids plastoglobuleM-48

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help