PPDB

The Plant Proteome Database

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AT1G16960.1   Ubiquitin domain-containing protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G53400.1 11Arabidopsis thaliana1E-5511171890 (0)_
AT5G45740.1 11Arabidopsis thaliana2E-5011464820 (0)_
Os09g17620.1 7Oryza sativa7E-5311466820 (0)_
Os01g53079.1 7Oryza sativa3E-3611165830 (0)_
Os05g45320.2 7Oryza sativa3E-3511163820 (0)_
GRMZM2G101282_P04 3.21Zea mays6E-5211165810 (0)_
v1_GRMZM2G101282_P01 4a53Zea mays6E-5211165810 (0)_
Zm00001eb098410_P001 agpv5Zea mays1E-4912160750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RHH_4(1) UBD(1)
TargetP: Cytoplasm (Class 3 C0.198; M0.190; S0.086; _0.691)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 114 aa (-cTP 105)
Molecular Weight 13.02 kDA(-cTP )
PI 6.13(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help