PPDB

PPDB	The Plant Proteome Database

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AT1G16830.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G53700.1 11 Arabidopsis thaliana 1E-45 620 24 44 65 (51) C
AT1G12775.1 11 Arabidopsis thaliana 2E-43 524 21 46 0 (0) M
AT1G64583.2 11 Arabidopsis thaliana 5E-43 397 27 49 0 (0) M
Os10g42760.1 7 Oryza sativa 3E-90 510 30 51 0 (0) M
Os06g05920.1 7 Oryza sativa 2E-39 363 28 49 0 (0) C
Os03g40020.1 7 Oryza sativa 2E-38 403 26 46 6 (6) C
v1_GRMZM2G025157_P01 4a53 Zea mays 3E-86 508 29 51 0 (0) M
Zm00001eb025110_P002 agpv5 Zea mays 3E-86 508 29 51 0 (0) M
Zm00001eb025110_P004 agpv5 Zea mays 3E-86 508 29 51 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(3) MRP-S27(3) PPR(12) PPR_1(8) PPR_2(10) PPR_3(6) PPR_long(4) Ribonuc_red
TargetP:	Mitochondria (Class 1 C0.009; M0.954; S0.024; _0.087)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	608 aa (-cTP 579)
Molecular Weight	69.67 kDA(-cTP )
PI	8.91(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data