PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G16700.1 Alpha-helical ferredoxin

Lab Annot.

NADH dehydrogenase (ubiquinone) (ATMLO14)
Mapman: 9.1.2 mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear

Curated Location

TAIR curated location: mitochondrion14671022,12606038,11743115

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G79010.1 11 Arabidopsis thaliana 1E-157 222 94 96 28 (28) M
ATCG01090.1 11 Arabidopsis thaliana 9E-16 124 35 50 234 (193) M
Os03g56300.1 7 Oryza sativa 1E-122 179 92 96 22 (22) M
Os10g21398.1 7 Oryza sativa 1E-14 124 33 50 13 (13) M
Osp1g00950.1 7 Oryza sativa 2E-14 124 33 50 37 (37) M
AC195340.3_FGP002 3.21 Zea mays 6E-123 179 92 96 7 (7) M
v1_AC195340.3_FGP002 4a53 Zea mays 6E-123 179 92 96 7 (6) M
GRMZM2G072806_P01 3.21 Zea mays 1E-118 172 93 97 6 (6) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	c-SKI_SMAD_bind(2) ETF_QO(2) Fer4(2) Fer4_10(2) Fer4_13(2) Fer4_16(2) Fer4_17(2)
TargetP:	Mitochondria (Class 1 C0.020; M0.922; S0.067; _0.017)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	222 aa (-cTP 186)
Molecular Weight	25.38 kDA(-cTP )
PI	5.22(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1745	Detail								[A. thaliana]		Col-0

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
12606038(Mitochondria-metalbinding)
19995728(proplastid (Brassica napus))
19546170(mature pollen grains)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21988472(vacuole (unfiltered data))
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data