PPDB

The Plant Proteome Database

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AT1G16610.3   arginine/serine-rich 45

Lab Annot. arginine/serine-rich 45
Mapman: 26.3 misc.gluco-, galacto- and mannosidases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G16610.1 11Arabidopsis thaliana042597976 (6)C
AT1G16610.2 11Arabidopsis thaliana042595956 (6)C
AT1G16610.7 11Arabidopsis thaliana039997970 (0)C
Os01g72890.1 7Oryza sativa4E-6222857640 (0)C
Os01g72890.2 7Oryza sativa5E-6222857640 (0)C
Os05g01540.2 7Oryza sativa4E-5126359670 (0)C
Zm00001eb362580_P001 agpv5Zea mays8E-5313865760 (0)C
Zm00001eb362580_P002 agpv5Zea mays8E-5313865760 (0)C
Zm00001eb362580_P003 agpv5Zea mays8E-5313865760 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(1) RRM_3(1) RRM_occluded(1)
TargetP: Chloroplast (Class 2 C0.920; M0.293; S0.000; _0.019)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 425 aa (-cTP 335)
Molecular Weight 46.60 kDA(-cTP 37.44)
PI 12.37(-cTP 12.22)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help