PPDB

The Plant Proteome Database

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AT1G16610.2   arginine/serine-rich 45

Lab Annot. arginine/serine-rich 45
Mapman: 26.3 misc.gluco-, galacto- and mannosidases
Curated Location
TAIR curated location: nucleoplasm & nuclear speck14675452
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G16610.1 11Arabidopsis thaliana041498986 (6)C
AT1G16610.3 11Arabidopsis thaliana042595956 (6)C
AT1G16610.4 11Arabidopsis thaliana03811001000 (0)C
Os01g72890.1 7Oryza sativa5E-6022656620 (0)C
Os01g72890.2 7Oryza sativa8E-6022656620 (0)C
Os05g01540.1 7Oryza sativa1E-4925757660 (0)C
Zm00001eb140450_P003 agpv5Zea mays1E-5016160720 (0)C
GRMZM2G060540_P02 3.21Zea mays1E-5016160720 (0)C
v1_GRMZM2G060540_P01 4a53Zea mays1E-5016160727 (7)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(1) RRM_3(1) RRM_occluded(1)
TargetP: Chloroplast (Class 2 C0.920; M0.293; S0.000; _0.019)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 407 aa (-cTP 317)
Molecular Weight 44.65 kDA(-cTP 35.49)
PI 12.40(-cTP 12.25)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
16807317(Phosphoproteins)
18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help