PPDB

The Plant Proteome Database

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AT1G16610.1   arginine/serine-rich 45

Lab Annot. arginine/serine-rich 45
Mapman: 26.3 misc.gluco-, galacto- and mannosidases
Curated Location
TAIR curated location: nucleoplasm & nuclear speck14675452
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G16610.3 11Arabidopsis thaliana042597976 (6)C
AT1G16610.2 11Arabidopsis thaliana041498986 (6)C
AT1G16610.7 11Arabidopsis thaliana03881001000 (0)C
Os01g72890.1 7Oryza sativa2E-6222857640 (0)C
Os01g72890.2 7Oryza sativa3E-6222857640 (0)C
Os05g01540.2 7Oryza sativa1E-5126359670 (0)C
Zm00001eb362580_P001 agpv5Zea mays2E-5313865760 (0)C
Zm00001eb362580_P002 agpv5Zea mays2E-5313865760 (0)C
Zm00001eb362580_P003 agpv5Zea mays2E-5313865760 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(1) RRM_3(1) RRM_occluded(1)
TargetP: Chloroplast (Class 2 C0.920; M0.293; S0.000; _0.019)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 414 aa (-cTP 324)
Molecular Weight 45.35 kDA(-cTP 36.19)
PI 12.40(-cTP 12.25)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
16807317(Phosphoproteins)
18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help