PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G16520.1   interactor of constitutive active ROPs protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G56080.1 11Arabidopsis thaliana1E-12231859731 (1)_
AT4G15545.1 11Arabidopsis thaliana4E-71324436263 (44)_
Os03g45760.1 7Oryza sativa7E-12133156700 (0)_
Os01g56235.1 7Oryza sativa3E-10232551690 (0)_
Os04g52570.1 7Oryza sativa2E-8532346640 (0)_
Zm00001eb052610_P001 agpv5Zea mays5E-12433956710 (0)_
GRMZM2G146143_P02 3.21Zea mays6E-12433855710 (0)_
v1_GRMZM2G146143_P02 4a53Zea mays6E-12433855710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ATG16(2) BRE1(1) DUF1818(2) DUF4472(1) Fez1(2) Hamartin(1) KASH_CCD(2) Spc24(2)
TargetP: Cytoplasm (Class 3 C0.217; M0.074; S0.071; _0.805)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 325 aa (-cTP 292)
Molecular Weight 36.43 kDA(-cTP )
PI 8.87(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
20706207(cell cycle interactome (cell culture))
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help