PPDB

 The Plant Proteome Database

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AT1G16410.1   cytochrome p450 79f1
Lab Annot. cytochrome p450 79f1
Mapman: 26.1 misc.cytochrome P450
Curated Location
TAIR curated location: endoplasmic reticulum11226190
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G16400.1 11Arabidopsis thaliana053788922 (2)S
AT1G16410.2 11Arabidopsis thaliana04161001009 (7)S
AT1G58260.1 11Arabidopsis thaliana5E-18052549660 (0)S
Os03g37290.1 7Oryza sativa2E-14550044610 (0)C
Os04g08828.1 7Oryza sativa6E-13749642620 (0)_
Os04g08824.1 7Oryza sativa4E-10848338580 (0)S
v1_GRMZM2G178351_P01 4a53Zea mays3E-13351941580 (0)S
Zm00001eb219290_P001 agpv5Zea mays3E-13351941580 (0)S
GRMZM2G178351_P01 3.21Zea mays3E-13351941580 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: p450(1) ScsC_N(1)
TargetP: Secreted (Class 1 C0.035; M0.024; S0.958; _0.015)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon:
TAT position:
Length 538 aa (-cTP 447)
Molecular Weight 61.69 kDA(-cTP )
PI 8.53(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1576Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to siliques)
20706207(contaminants cell cycle interactome (cell culture))
21693672(wound-regulated leaf proteome (AOS mutant))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help