PPDB

 The Plant Proteome Database

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AT1G16360.1   LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
Lab Annot.
Mapman: 34.99 transport.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G16360.2 11Arabidopsis thaliana03201001000 (0)C
AT1G16360.4 11Arabidopsis thaliana032099990 (0)_
AT1G79450.1 11Arabidopsis thaliana031885920 (0)C
Os06g45430.1 7Oryza sativa2E-16432067790 (0)_
Os02g07750.1 7Oryza sativa3E-16331967820 (0)C
Os03g02830.1 7Oryza sativa9E-15331763800 (0)_
v1_GRMZM2G454299_P01 4a53Zea mays8E-16432365800 (0)_
GRMZM2G058900_P01 3.21Zea mays6E-16332166790 (0)C
Zm00001eb274400_P002 agpv5Zea mays6E-16332166790 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CDC50(1)
TargetP: Cytoplasm (Class 3 C0.103; M0.079; S0.206; _0.701)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 336 aa (-cTP 327)
Molecular Weight 38.07 kDA(-cTP )
PI 9.37(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 15815986(Silique)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help