PPDB

PPDB	The Plant Proteome Database

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AT1G16280.1 RNA helicase 36

Lab Annot.

DEAD box RNA helicase (RH36) (SWA3) 18S rRNA
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

nucleus (Pubmed: 20378763 20738726 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G60990.1 11 Arabidopsis thaliana 1E-111 413 44 64 1 (1) _
AT4G16630.1 11 Arabidopsis thaliana 2E-77 408 38 55 0 (0) _
AT1G55150.1 11 Arabidopsis thaliana 9E-68 383 35 54 20 (0) _
Os07g43980.1 7 Oryza sativa 0 416 60 76 0 (0) _
Os03g46610.1 7 Oryza sativa 3E-109 417 44 62 1 (1) _
Os03g46610.2 7 Oryza sativa 3E-107 400 45 63 1 (1) _
Zm00001eb328480_P002 agpv5 Zea mays 0 414 61 77 0 (0) _
GRMZM2G099253_P01 3.21 Zea mays 2E-151 324 64 79 0 (0) _
Zm00001eb328480_P001 agpv5 Zea mays 2E-151 324 64 79 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_19(2) DEAD(1) GST_N_3(1) Helicase_C(1) ResIII(1) UTP25(1)
TargetP:	Cytoplasm (Class 2 C0.206; M0.089; S0.039; _0.881)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	491 aa (-cTP 435)
Molecular Weight	54.84 kDA(-cTP )
PI	9.00(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data