PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G16210.1   coiled-coil protein

Lab Annot. unknown protein DUF1014 domain
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os04g47370.2 7Oryza sativa7E-76233617921 (21)_
Os04g47370.1 7Oryza sativa6E-75234607821 (21)_
Os03g03980.1 7Oryza sativa3E-6622960820 (0)_
Zm00001eb074070_P001 agpv5Zea mays9E-7323561790 (0)_
Zm00001eb074070_P002 agpv5Zea mays9E-7323561790 (0)_
v1_GRMZM2G101408_P02 4a53Zea mays9E-7323561791 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ccdc124(1) YABBY(2)
TargetP: Cytoplasm (Class 3 C0.162; M0.169; S0.058; _0.721)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 234 aa (-cTP 224)
Molecular Weight 26.83 kDA(-cTP )
PI 9.22(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help