PPDB

PPDB	The Plant Proteome Database

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AT1G16190.1 Rad23 UV excision repair protein family

Lab Annot.

Mapman: 28.2 DNA.repair

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G16190.2 11 Arabidopsis thaliana 0 345 100 100 0 (0) _
AT1G79650.2 11 Arabidopsis thaliana 0 370 82 88 0 (0) _
AT1G79650.1 11 Arabidopsis thaliana 0 373 81 88 0 (0) _
Os02g08300.2 7 Oryza sativa 3E-152 374 64 76 2 (2) _
Os02g08300.1 7 Oryza sativa 1E-150 375 64 76 2 (2) _
Os09g24200.2 7 Oryza sativa 4E-128 391 51 68 0 (0) _
GRMZM2G143462_P06 3.21 Zea mays 6E-145 371 62 74 0 (0) _
GRMZM2G143462_P02 3.21 Zea mays 6E-145 371 62 74 0 (0) _
GRMZM2G143462_P03 3.21 Zea mays 6E-145 371 62 74 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CUE(3) DUF2407(1) DUF515(1) MGC-24(1) Rad60-SLD(1) UBA(2) UBA_3(1) ubiquitin(1)
TargetP:	Cytoplasm (Class 2 C0.017; M0.247; S0.017; _0.917)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	368 aa (-cTP 344)
Molecular Weight	39.84 kDA(-cTP )
PI	4.40(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data