PPDB

 The Plant Proteome Database

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AT1G16070.1   tubby like protein 8
Lab Annot. tubby like protein 8
Mapman: 27.3.31 RNA.regulation of transcription.TUB transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G16070.2 11Arabidopsis thaliana03501001001 (1)_
AT1G16070.3 11Arabidopsis thaliana02901001000 (0)_
AT1G25280.2 11Arabidopsis thaliana3E-1010437500 (0)_
Os02g08310.1 7Oryza sativa2E-11528858760 (0)M
Os02g47640.1 7Oryza sativa9E-1228427380 (0)_
Os07g47110.1 7Oryza sativa2E-1014934500 (0)C
v1_GRMZM2G472945_P02 4a53Zea mays4E-11428558760 (0)M
Zm00001eb233920_P002 agpv5Zea mays4E-11428558760 (0)M
GRMZM2G472945_P02 3.21Zea mays4E-11428558760 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF3527(2) Tub(1)
TargetP: Cytoplasm (Class 2 C0.108; M0.049; S0.016; _0.890)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 397 aa (-cTP 341)
Molecular Weight 44.49 kDA(-cTP )
PI 9.69(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help