PPDB

 The Plant Proteome Database

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AT1G16030.1   heat shock protein 70B
Lab Annot. Hsp70B or HSP70-5
Mapman: 29.6 protein.folding
Curated Location not plastid (Pubmed: 18065690 ) (supported by in-house exprements)

TAIR curated location: cytosol11402207
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G12580.1 11Arabidopsis thaliana06518491781 (488)_
AT5G02500.1 11Arabidopsis thaliana065181901663 (1087)_
AT3G09440.1 11Arabidopsis thaliana064982901190 (748)_
Os05g38530.1 7Oryza sativa0641859252 (52)_
Os11g47760.1 7Oryza sativa06498491137 (137)_
Os01g62290.1 7Oryza sativa0648839167 (67)_
AC209784.3_FGP007 3.21Zea mays0648849160 (44)_
Zm00001eb148420_P001 agpv5Zea mays064884910 (0)_
v1_AC209784.3_FGP007 4a53Zea mays0648849151 (51)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DDR(2) DUF4795(2) FGGY_C(1) GLE1(2) HSP70(1) Hydantoinase_A(2) MreB_Mbl(2) PG_bi
TargetP: Cytoplasm (Class 2 C0.118; M0.098; S0.141; _0.803)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 646 aa (-cTP 642)
Molecular Weight 70.91 kDA(-cTP )
PI 5.30(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
272Detail       leaf [A. thaliana] chloroplast stromaclpr2-1
324Detail       leaf [A. thaliana] cell wall enriched wild-type
339Detail       leaf [A. thaliana] chloroplast stromawild-type
355Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
542Detail       leaf [A. thaliana] stroma (FPLC) >500 kDa (HMB) wild-type
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
874Detail       leaf [A. thaliana] chloroplast stromawild-type
1176Detail       leaf [A. thaliana] co-IP ClpR2 stromawild-type
1332Detail       leaf [A. thaliana] chloroplast thylakoid membraneshoot1
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1508Detail        [A. thaliana]  
1513Detail       leaf [A. thaliana] wild-type
1514Detail       leaf [A. thaliana] wild-type
1521Detail       leaf [A. thaliana] wild-type
1540Detail       leaf [A. thaliana] Thylakoids plastoglobulewild-type
1639Detail       leaf [A. thaliana] total leaf tissue stromaclpt2-1
1707Detail        [A. thaliana] sht1
1745Detail        [A. thaliana] Col-0
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
1938Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2007Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2180Detail       leaf [A. thaliana] stroma Clp ClpF
2254Detail       leaf [A. thaliana] total seedlings gfs9
2269Detail       seedlings [A. thaliana] total tissue wild-type
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2301Detail        [A. thaliana] Clp C1 TRAP
2303Detail        [A. thaliana] Clp C1 WT
2309Detail       leaf [A. thaliana] PG plastoglobule 
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 15028209(Total chloroplast)
16287169(Cell Wall proteome)
11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
15908592(Carbonylated seed protein)
17317660(Plasma Membrane proteome)
17432890(leaf total membranes)
18599647(seed proteome)
18814325(cotyledons)
19200160(flower-stage 12)
19546170(mature pollen grains)
19888209(80S polysomal fraction)
20706207(contaminants cell cycle interactome (cell culture))
19423572(leaf (wt and clpr2-1))
19292762(Ubiquitin-affinity seedling (10 d))
22010978(Endosomal-sorting-interactome-VPS2.2)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help