PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G15940.1   Tudor/PWWP/MBT superfamily protein

Lab Annot. Tudor/PWWP/MBT protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G80810.3 11Arabidopsis thaliana075852640 (0)_
AT1G80810.5 11Arabidopsis thaliana070453650 (0)_
AT1G80810.4 11Arabidopsis thaliana070452650 (0)S
Os02g39920.1 7Oryza sativa2E-61245446421 (21)_
Os06g17840.1 7Oryza sativa9E-41213406228 (28)_
Os04g25960.1 7Oryza sativa1E-3025235550 (0)_
v1_GRMZM2G106308_P01 4a53Zea mays6E-7864633503 (3)_
GRMZM2G106308_P01 3.21Zea mays6E-7864633506 (5)_
Zm00001eb184560_P003 agpv5Zea mays6E-7864633500 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LBR_tudor(1)
TargetP: Cytoplasm (Class 3 C0.206; M0.043; S0.090; _0.800)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 990 aa (-cTP 910)
Molecular Weight 109.59 kDA(-cTP )
PI 5.30(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
22060019(phosphoproteome - N-starved seedlings)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help