PPDB

The Plant Proteome Database

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AT1G15860.1   defective in cullin neddylation protein (DUF298)

Lab Annot. unknown protein with DUF298 domain
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G15860.2 11Arabidopsis thaliana1E-1722271001005 (1)M
AT1G15860.3 11Arabidopsis thaliana2E-16923696965 (1)M
AT3G12760.1 11Arabidopsis thaliana2E-3120732571 (1)_
Os08g34070.1 7Oryza sativa5E-10422263790 (0)C
Os08g34070.2 7Oryza sativa6E-10119769820 (0)M
Os06g12690.3 7Oryza sativa5E-32189315815 (15)_
Zm00001eb041230_P001 agpv5Zea mays5E-10322263780 (0)C
Zm00001eb041230_P002 agpv5Zea mays5E-10322263780 (0)C
GRMZM2G067067_P05 3.21Zea mays5E-10322263780 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cullin_binding(1) DUF1160(1) NAT_N(1)
TargetP: Mitochondria (Class 5 C0.189; M0.457; S0.035; _0.297)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 227 aa (-cTP 203)
Molecular Weight 26.64 kDA(-cTP )
PI 5.57(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help