PPDB

PPDB	The Plant Proteome Database

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AT1G15820.1 light harvesting complex photosystem II subunit 6

Lab Annot.

LHCII-6 - CP24
Mapman: 1.1.1.1 PS.lightreaction.photosystem II.LHC-II

Curated Location

thylakoid-integral (Pubmed: 23198870 18431481 ) (supported by in-house exprements)

TAIR curated location: thylakoid membrane (sensu Viridiplantae)15322131

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G19150.1 11 Arabidopsis thaliana 6E-37 212 41 52 119 (117) C
AT1G45474.1 11 Arabidopsis thaliana 9E-36 215 40 54 154 (154) M
AT1G45474.2 11 Arabidopsis thaliana 9E-36 215 40 54 153 (153) M
Os04g38410.1 7 Oryza sativa 2E-135 247 79 87 290 (290) C
Os02g52650.1 7 Oryza sativa 8E-43 211 45 56 47 (47) C
Os09g26810.1 7 Oryza sativa 2E-37 251 37 50 44 (44) C
Zm00001eb066480_P001 agpv5 Zea mays 1E-131 205 88 93 0 (0) C
GRMZM2G039996_P02 3.21 Zea mays 1E-131 205 88 93 287 (285) C
GRMZM2G039996_P01 3.21 Zea mays 1E-131 205 88 93 287 (285) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Chloroa_b-bind(1)
TargetP:	Mitochondria (Class 5 C0.285; M0.368; S0.064; _0.077)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	258 aa (-cTP 212)
Molecular Weight	27.52 kDA(-cTP )
PI	6.75(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
36	Detail								leaf [A. thaliana]	plastid thylakoid membrane	wild-type
39	Detail								leaf [A. thaliana]	plastid thylakoid membrane	wild-type
45	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
46	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
47	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
48	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
101	Detail								leaf [A. thaliana]	plastid thylakoid membrane	wild-type
105	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
106	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
107	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
115	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
122	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
218	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type
221	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type
225	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type
242	Detail								leaf [A. thaliana]	total leaf tissue	clpr2-1
243	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
244	Detail								leaf [A. thaliana]	total leaf tissue	clpr2-1
245	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
303	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
310	Detail								leaf [A. thaliana]	total leaf tissue	clpr2-1:R2-TAPlong
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
326	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
327	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
339	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
342	Detail								leaf [A. thaliana]	chloroplast low density membrane	wild-type
343	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
351	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
352	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
355	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
356	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
393	Detail								leaf [A. thaliana]		ffc1-2
394	Detail								leaf [A. thaliana]		ffc1-2
395	Detail								leaf [A. thaliana]	total leaf tissue	ffc1-2
396	Detail								leaf [A. thaliana]	total leaf tissue	ffc1-2
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
484	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
542	Detail								leaf [A. thaliana]	stroma (FPLC) >500 kDa (HMB)	wild-type
640	Detail								leaf [A. thaliana]	plastid nucleoid	wild-type
641	Detail								[A. thaliana]	plastid nucleoid (crude)	wild-type
666	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type (rep. 1-1)
671	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2 (rep. 3-1)
681	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k3 (rep. 1-1)
682	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k3 (rep. 2-1)
685	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3 (rep. 1-2)
686	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2 (rep. 1-2)
692	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type (rep. 1-2)
693	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type (rep. 2-2)
694	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type (rep. 3-2)
771	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type (rep. 1 - 5ug)
773	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type (rep. 2 - 5 ug)
774	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type (rep. 2- 10 ug)
775	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type (rep. 3 - 5 ug)
776	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type (rep. 3 - 10 ug)
869	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
870	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
871	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
872	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type (1-8); k2k3 (9-10)
873	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
874	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
875	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
876	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
877	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
888	Detail								[A. thaliana]		R4Strep
1113	Detail								[A. thaliana]	control for RARE-1 co-IP	wild-type
1114	Detail								[A. thaliana]	RARE1 co-IP	rare-1
1122	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type
1123	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type
1124	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type
1125	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1126	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1127	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1260	Detail								leaf [A. thaliana]	co-IP SHOOT1 (rep. 1) thylakoid membrane	wild-type
1261	Detail								leaf [A. thaliana]	co-IP SHOOT1 (rep. 1) thylakoid membrane	shoot1 (null mutant)
1262	Detail								leaf [A. thaliana]	co-IP SHOOT1 (rep. 2) thylakoid membrane	wild-type
1263	Detail								leaf [A. thaliana]	co-IP SHOOT1 (rep. 2) thylakoid membrane	shoot1 (null mutant)
1264	Detail								leaf [A. thaliana]	co-IP SHOOT1 (rep. 3) thylakoid membrane	wild-type
1265	Detail								leaf [A. thaliana]	co-IP SHOOT1 (rep. 3) thylakoid membrane	shoot1 (null mutant)
1331	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
1332	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	shoot1
1345	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 1)
1346	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 2)
1347	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 3)
1348	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 1)
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1356	Detail								leaf [A. thaliana]	total tissue - low mass region	wild-type
1357	Detail								leaf [A. thaliana]	total tissue - low mass region	clpt1xclpt2
1365	Detail								[A. thaliana]	chloroplast fractionation
1366	Detail								[A. thaliana]	chloroplast fractionation
1367	Detail								[A. thaliana]	chloroplast fractionation
1368	Detail								[A. thaliana]	chloroplast fractionation
1369	Detail								[A. thaliana]	chloroplast fractionation
1370	Detail								[A. thaliana]	chloroplast fractionation
1372	Detail								Total leaf 5d ML stress [A. thaliana]	chloroplast plastoglobule	wild-type
1384	Detail								[A. thaliana]	chloroplast fractionation
1385	Detail								[A. thaliana]	chloroplast fractionation
1386	Detail								[A. thaliana]	chloroplast fractionation
1387	Detail								[A. thaliana]	chloroplast fractionation
1388	Detail								[A. thaliana]	chloroplast fractionation
1389	Detail								[A. thaliana]	chloroplast fractionation
1392	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1393	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1394	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1395	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1396	Detail								leaf [A. thaliana]	total leaf tissue	clpt1xclpt2 (rep. 2)
1397	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1400	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1401	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1402	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1404	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1406	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1408	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1409	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	wild-type
1410	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	wild-type
1411	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	clpr2-1
1412	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	clpr2-1
1413	Detail								leaf [A. thaliana]	total leaf tissue -114 rep1tR1	wild-type
1414	Detail								leaf [A. thaliana]	total leaf tissue -114 rep1tR2	wild-type
1415	Detail								leaf [A. thaliana]	total leaf tissue 1.14 rep 1.1	clpr2-1
1416	Detail								leaf [A. thaliana]	total leaf tissue 1.14 rep 1.2	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1424	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 1)
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1432	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1445	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 1)
1446	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 2)
1447	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 3)
1448	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 1)
1449	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 2)
1450	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1453	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1454	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 2)
1485	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 3)
1494	Detail								leaf [A. thaliana]
1495	Detail								leaf [A. thaliana]		wild-type
1496	Detail								leaf [A. thaliana]		Prep1_Prep2_t1_t2
1505	Detail								[A. thaliana]		wild-type
1506	Detail								[A. thaliana]
1507	Detail								[A. thaliana]		wild-type
1508	Detail								[A. thaliana]
1513	Detail								leaf [A. thaliana]		wild-type
1514	Detail								leaf [A. thaliana]		wild-type
1515	Detail								leaf [A. thaliana]		wild-type
1516	Detail								leaf [A. thaliana]		wild-type
1517	Detail								leaf [A. thaliana]		wild-type
1518	Detail								leaf [A. thaliana]		wild-type
1519	Detail								leaf [A. thaliana]		wild-type
1520	Detail								leaf [A. thaliana]		wild-type
1521	Detail								leaf [A. thaliana]		wild-type
1522	Detail								leaf [A. thaliana]		wild-type
1523	Detail								leaf [A. thaliana]		wild-type
1524	Detail								leaf [A. thaliana]		wild-type
1525	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
1531	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	wild-type (rep. 1)
1532	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	clps (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
1538	Detail								leaf [A. thaliana]	plastid RNCs thylakoid membrane	wild-type
1539	Detail								leaf [A. thaliana]		wild-type
1540	Detail								leaf [A. thaliana]	Thylakoids plastoglobule	wild-type
1541	Detail								leaf [A. thaliana]	Thylakoids plastoglobule	M-48
1542	Detail								leaf [A. thaliana]		wild-type
1544	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k1xk3
1545	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
1546	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k1xk3
1547	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k1k3
1548	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
1549	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
1550	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k1k3
1551	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k1k3
1552	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
1553	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
1554	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k1k3
1555	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k1k3
1556	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
1557	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
1566	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k2k3
1567	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k2k3
1568	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT
1569	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k1k3
1572	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT
1574	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k2k3
1575	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT
1576	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1577	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT
1578	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1579	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT
1580	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1581	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1582	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1583	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1584	Detail								[A. thaliana]
1585	Detail								[A. thaliana]
1586	Detail								[A. thaliana]
1587	Detail								[A. thaliana]
1588	Detail								[A. thaliana]
1594	Detail								[A. thaliana]
1596	Detail								[A. thaliana]
1597	Detail								[A. thaliana]
1599	Detail								[A. thaliana]
1600	Detail								[A. thaliana]
1611	Detail								leaf [A. thaliana]	chloroplast fractionation thylakoid membrane
1612	Detail								Natural Senescence leaf [A. thaliana]	chloroplast fractionation thylakoid membrane
1613	Detail								Natural Senescence leaf [A. thaliana]
1614	Detail								Natural Senescence leaf [A. thaliana]
1615	Detail								Natural Senescence leaf [A. thaliana]
1616	Detail								Natural Senescence leaf [A. thaliana]
1617	Detail								[A. thaliana]		m48
1618	Detail								[A. thaliana]		m48
1619	Detail								[A. thaliana]		m48
1620	Detail								[A. thaliana]		m48
1621	Detail								[A. thaliana]		m48
1622	Detail								[A. thaliana]		m48
1625	Detail								Rosettes [A. thaliana]		Wild-type
1626	Detail								Rosettes [A. thaliana]		k1xk3
1627	Detail								Rosettes [A. thaliana]	total leaf tissue thylakoid + envelope	Wild-type
1628	Detail								Rosettes [A. thaliana]	total leaf tissue thylakoid + envelope	k1xk3
1629	Detail								Rosettes [A. thaliana]		Wild-type
1630	Detail								Rosettes [A. thaliana]	total leaf tissue thylakoid + envelope	k1xk3
1641	Detail								leaf [A. thaliana]	total tissue	shoot1 mutant
1643	Detail								leaf [A. thaliana]	total leaf tissue	Wild-type
1650	Detail								leaf [A. thaliana]	plastoglobules plastoglobule	m48
1651	Detail								leaf [A. thaliana]	plastoglobules plastoglobule	wild-type
1674	Detail								Rosettes [A. thaliana]
1675	Detail								Rosettes [A. thaliana]
1676	Detail								Rosettes [A. thaliana]
1677	Detail								Rosettes [A. thaliana]
1678	Detail								Rosettes [A. thaliana]
1679	Detail								Rosettes [A. thaliana]
1694	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	Wild-type
1695	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	Wild-type
1696	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	k1k3
1697	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	k1k3
1698	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	k5-1
1699	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	k5-1
1707	Detail								[A. thaliana]		sht1
1708	Detail								[A. thaliana]		Wild-type
1709	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	Wild-type
1710	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	Wild-type
1711	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	Wild-type
1712	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	Wild-type
1713	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	k1k3
1714	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	k1k3
1715	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	k5-1
1716	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	k5-1
1717	Detail								[A. thaliana]
1718	Detail								[A. thaliana]
1719	Detail								[A. thaliana]
1720	Detail								[A. thaliana]
1744	Detail								[A. thaliana]		Mep-6
1745	Detail								[A. thaliana]		Col-0
1748	Detail								leaf [A. thaliana]	total leaf tissue	Col_0
1749	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1756	Detail								leaf [A. thaliana]	total leaf tissue	Col_0
1757	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1758	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag+fosmidomycin
1765	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0
1766	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1
1828	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0 Fluctuating light
1829	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1 Fluctuating light
1830	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0 Normal light
1831	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1 Normal light
1832	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0 Normal light
1833	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1
1907	Detail								leaf [A. thaliana]	total leaf tissue	Col_0
1908	Detail								leaf [A. thaliana]	total leaf tissue	clb19_myc
1909	Detail								leaf [A. thaliana]	total leaf tissue	Col_0
1910	Detail								leaf [A. thaliana]	total leaf tissue	clb19_myc
1911	Detail								leaf [A. thaliana]	total leaf tissue	Col_0
1912	Detail								leaf [A. thaliana]	total leaf tissue	clb19_myc
1913	Detail								Rosettes [A. thaliana]	Thylakoids	wild-type
1914	Detail								Rosettes [A. thaliana]	Thylakoids	wild-type
1916	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
1917	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
1918	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
1919	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
1920	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
1921	Detail								leaf [A. thaliana]	total leaf tissue	k1k3 double
1922	Detail								leaf [A. thaliana]	total leaf tissue	k1k3 double
1923	Detail								leaf [A. thaliana]	total leaf tissue	k1k3 double
1924	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
1925	Detail								leaf [A. thaliana]	total leaf tissue	k1xk3 mutant (TiO2)
1926	Detail								leaf [A. thaliana]	total leaf tissue	k1xk3 mutant (TiO2)
1927	Detail								leaf [A. thaliana]	total leaf tissue	k1xk3 mutant (TiO2)
1928	Detail								Rosettes [A. thaliana]	Thylakoids	wild-type
1929	Detail								Rosettes [A. thaliana]	Thylakoids	wild-type
1930	Detail								leaf [A. thaliana]	total leaf tissue	Col_0 Wild-type
1931	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1932	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1933	Detail								leaf [A. thaliana]	chloroplast	wild-type
1934	Detail								leaf [A. thaliana]	chloroplast	wild-type
1935	Detail								leaf [A. thaliana]	chloroplast	wild-type
1936	Detail								leaf [A. thaliana]	chloroplast	Prep1_Prep2
1937	Detail								leaf [A. thaliana]	chloroplast	Prep1_Prep2
1938	Detail								leaf [A. thaliana]	chloroplast	Prep1_Prep2
1941	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1942	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1943	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1944	Detail								leaf [A. thaliana]	stroma UVR stroma	UVR
1945	Detail								leaf [A. thaliana]	stroma UVR stroma	UVR
1946	Detail								leaf [A. thaliana]	stroma UVR stroma	wild-type
1947	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1948	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1983	Detail								leaf [A. thaliana]	plastid	wild-type
1984	Detail								leaf [A. thaliana]	plastid	wild-type
1985	Detail								leaf [A. thaliana]	plastid	wild-type
1986	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
1987	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
1988	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
2001	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS1
2003	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2004	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2005	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2007	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2021	Detail								leaf [A. thaliana]	total leaf tissue
2028	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2029	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2030	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2132	Detail								leaf [A. thaliana]	chloroplast fractionation	MSH1
2133	Detail								leaf [A. thaliana]	chloroplast fractionation	MSH1
2241	Detail								seedlings [A. thaliana]	total tissue	gfs9
2287	Detail								[A. thaliana]		Clp C1 WT
2291	Detail								[A. thaliana]		Clp C1 TRAP
2297	Detail								[A. thaliana]		Clp C1 WT
2303	Detail								[A. thaliana]		Clp C1 WT
2308	Detail								leaf [A. thaliana]	PG plastoglobule
2309	Detail								leaf [A. thaliana]	PG plastoglobule
2310	Detail								leaf [A. thaliana]	PG plastoglobule
2311	Detail								leaf [A. thaliana]	PG plastoglobule
2312	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2313	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2314	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2315	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2316	Detail								leaf [A. thaliana]	PG plastoglobule
2317	Detail								leaf [A. thaliana]	PG plastoglobule
2318	Detail								leaf [A. thaliana]	PG plastoglobule
2319	Detail								leaf [A. thaliana]	PG plastoglobule
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6
2399	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1WTSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
12766230(Total chloroplast envelope)
14729914(thylakoid stripped)
15322131(Thylakoid-stripped)
17293592(total seedlings û light and dark grown)
17432890(leaf total membranes)
18633119(young leaf)
18633119(thylakoid)
17660356(tonoplast (Brassica oleracea buds))
18431481(chloroplast)
19995728(proplastid (Brassica napus))
19200160(flower-stage 12)
18690651(embryo (3 WAF) B. napus)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19334764(plasma membrane (cell culture))
19888209(80S polysomal fraction)
19888209(leaves)
19376835(leaf phosphoproteins)
19329564(peroxisomes (leaf))
20166762(whole leaf)
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
19423572(leaf (wt and clpr2-1))
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
21533090(plasmodesmata-crude)
21311031(chloroplasts)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
21988472(vacuole (unfiltered data))
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data