PPDB

 The Plant Proteome Database

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AT1G15750.1   Transducin family protein / WD-40 repeat family protein
Lab Annot. TPL/WSIP1 (WUS-INTERACTING PROTEIN 1)
Mapman: 35.1 not assigned.no ontology
Curated Location
TAIR curated location: nucleus16763149
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G15750.2 11Arabidopsis thaliana0113110010037 (23)S
AT1G15750.3 11Arabidopsis thaliana0113110010037 (23)S
AT1G15750.4 11Arabidopsis thaliana0113110010037 (23)S
Os03g14980.1 7Oryza sativa01143788839 (39)S
Os03g14980.2 7Oryza sativa01143788839 (39)S
Os08g06480.1 7Oryza sativa01151677926 (26)S
Zm00001eb398420_P004 agpv5Zea mays0114177870 (0)S
Zm00001eb398420_P002 agpv5Zea mays0114177870 (0)S
Zm00001eb398420_P005 agpv5Zea mays0114177870 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ANAPC4_WD40(6) LisH_TPL(1) WD40(10)
TargetP: Secreted (Class 5 C0.095; M0.094; S0.598; _0.453)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1131 aa (-cTP 1118)
Molecular Weight 124.30 kDA(-cTP )
PI 6.80(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1544Detail       leaf [A. thaliana] TiO2 thylakoid membranek1xk3
1547Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1548Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1552Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2251Detail       seedlings [A. thaliana] total tissue wild-type
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

 18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19888209(leaves)
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

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