PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G15710.1 prephenate dehydrogenase family protein

Lab Annot.

Arogenate dehydrogenase TYRAAt2
Mapman: 13.1.6.3.1 amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase

Curated Location

plastid stroma (Pubmed: 23198870 19136569 18431481 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G34930.3 11 Arabidopsis thaliana 1E-134 299 60 78 0 (0) _
AT5G34930.1 11 Arabidopsis thaliana 3E-134 299 60 78 4 (0) C
AT5G34930.2 11 Arabidopsis thaliana 5E-134 299 60 78 0 (0) C
Os06g49505.1 7 Oryza sativa 3E-139 298 62 76 11 (11) C
Os06g49520.1 7 Oryza sativa 8E-126 334 55 69 0 (0) C
Os06g35050.1 7 Oryza sativa 4E-121 262 61 77 0 (0) M
v1_GRMZM2G084942_P01 4a53 Zea mays 1E-137 299 61 76 26 (26) M
Zm00001eb227480_P001 agpv5 Zea mays 1E-137 299 61 76 0 (0) M
GRMZM2G084942_P01 3.21 Zea mays 1E-137 299 61 76 82 (37) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	2-Hacid_dh_C(1) ApbA(1) F420_oxidored(1) GFO_IDH_MocA(1) NAD_binding_2(1) NAD_Gl
TargetP:	Chloroplast (Class 4 C0.711; M0.320; S0.033; _0.075)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	358 aa (-cTP 323)
Molecular Weight	40.63 kDA(-cTP 36.63)
PI	7.66(-cTP 6.10)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
303	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
326	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
541	Detail								leaf [A. thaliana]	stroma (FPLC) >1 MDa stroma	wild-type
869	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
870	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
871	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
873	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1175	Detail								leaf [A. thaliana]	co-IP RH3 stroma	wild-type
1178	Detail								leaf [A. thaliana]	co-IP RH3 stroma	clpr2-1
1463	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 3)
1486	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 3)
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2112	Detail								leaf [A. thaliana]	Stroma stroma	wt
2113	Detail								leaf [A. thaliana]	Stroma stroma	wt
2114	Detail								leaf [A. thaliana]	Stroma stroma	wt
2116	Detail								leaf [A. thaliana]	Stroma stroma	cGep
2147	Detail								Total leaf [A. thaliana]	total soluble stroma	wt & cgep
2151	Detail								Total leaf [A. thaliana]	total soluble stroma	wt & cgep
2290	Detail								[A. thaliana]		Clp C1 TRAP
2300	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19546170(mature pollen grains)
19995723(chloroplast reference proteome)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data