PPDB

 The Plant Proteome Database

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AT1G15700.1   ATPase%2C F1 complex%2C gamma subunit protein
Lab Annot. ATP synthase gamma chain 2 (ATPC2) (non-photosynthetic plastid root)
Mapman: 1.1.4 PS.lightreaction.ATP synthase
Curated Location plastid (Pubmed: 23198870 22328157 )

TAIR curated location: chloroplast ATP synthase complex & chloroplast1826905
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G04640.1 11Arabidopsis thaliana3E-17333871841647 (1447)C
AT2G33040.1 11Arabidopsis thaliana3E-313473249442 (340)M
Os07g32880.1 7Oryza sativa1E-165325688587 (87)C
Os10g17280.1 7Oryza sativa5E-27326294877 (77)M
Zm00001eb322600_P001 agpv5Zea mays3E-16533168830 (0)C
GRMZM2G048907_P01 3.21Zea mays1E-1643316883496 (404)C
v1_GRMZM2G048907_P01 4a53Zea mays1E-1643316883425 (425)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ATP-synt(1) PfkB(2)
TargetP: Chloroplast (Class 1 C0.938; M0.022; S0.014; _0.112)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 386 aa (-cTP 326)
Molecular Weight 42.68 kDA(-cTP 36.11)
PI 6.70(-cTP 5.47)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2312Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

 15028209(Total chloroplast)
19546170(mature pollen grains)
19995723(chloroplast reference proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help