PPDB

The Plant Proteome Database

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AT1G15600.1   transmembrane protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G15620.1 11Arabidopsis thaliana1E-4519645600 (0)_
AT1G15610.1 11Arabidopsis thaliana2E-3723738540 (0)_
AT1G15630.1 11Arabidopsis thaliana4E-3218840551 (1)_
Os02g54624.1 7Oryza sativa1E-1617935440 (0)_
Os05g08610.4 7Oryza sativa1E-1417832440 (0)_
Os05g08610.1 7Oryza sativa1E-1417832440 (0)_
GRMZM2G089466_P01 3.21Zea mays1E-1618134430 (0)_
Zm00001eb257360_P004 agpv5Zea mays1E-1617435430 (0)_
v1_GRMZM2G089466_P01 4a53Zea mays1E-1618134430 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3938(2) DUF4079(2)
TargetP: Cytoplasm (Class 2 C0.169; M0.066; S0.119; _0.860)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 5 TMs
TAT position:
Length 220 aa (-cTP 204)
Molecular Weight 24.71 kDA(-cTP )
PI 4.25(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help