PPDB

PPDB	The Plant Proteome Database

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AT1G15590.1 E3 ubiquitin-protein ligase

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G15590.2 11 Arabidopsis thaliana 2E-129 179 100 100 0 (0) _
AT1G80400.1 11 Arabidopsis thaliana 6E-34 201 37 47 0 (0) _
AT4G32600.2 11 Arabidopsis thaliana 2E-21 157 30 45 0 (0) M
Os02g54624.1 7 Oryza sativa 2E-22 238 29 42 0 (0) _
Os05g08610.4 7 Oryza sativa 2E-19 221 28 40 0 (0) _
Os05g08610.1 7 Oryza sativa 2E-19 221 28 40 0 (0) _
GRMZM2G092244_P01 3.21 Zea mays 4E-22 216 31 45 0 (0) _
GRMZM2G092244_P03 3.21 Zea mays 4E-22 216 31 45 0 (0) _
v1_GRMZM2G092244_P01 4a53 Zea mays 4E-22 216 31 45 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CoA_binding_3(2) DUF1461(2) DUF1772(1) DUF3278(2) DUF3810(1) DUF3938(1) DUF4870(
TargetP:	Cytoplasm (Class 2 C0.256; M0.043; S0.011; _0.933)
Predotar:
Subcel. Location:
TM-HMM prediction:	3 TMs
Aramemnon:	3 TMs
TAT position:
Length	179 aa (-cTP 104)
Molecular Weight	20.14 kDA(-cTP )
PI	5.00(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data