PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G15580.1   indole-3-acetic acid inducible 5

Lab Annot.
Mapman: 27.3.40 RNA.regulation of transcription.Aux/IAA family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G15540.1 11Arabidopsis thaliana5E-4819052600 (0)_
AT5G43700.1 11Arabidopsis thaliana4E-4417351640 (0)_
AT1G52830.1 11Arabidopsis thaliana1E-4318550601 (1)_
Os03g43400.1 7Oryza sativa6E-3921740500 (0)_
Os03g53150.1 7Oryza sativa3E-3713647610 (0)_
Os05g14180.1 7Oryza sativa5E-3512453650 (0)_
GRMZM2G035465_P04 3.21Zea mays5E-4120442530 (0)_
Zm00001eb350370_P001 agpv5Zea mays5E-4120442530 (0)_
v1_GRMZM2G035465_P04 4a53Zea mays5E-4120442530 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AUX_IAA(2)
TargetP: Cytoplasm (Class 3 C0.329; M0.072; S0.139; _0.775)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 163 aa (-cTP 103)
Molecular Weight 18.35 kDA(-cTP )
PI 6.37(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help