PPDB

PPDB	The Plant Proteome Database

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AT1G15510.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

PPR protein AtECB2 - editing of accD & ndhF
Mapman: 27.1.5* RNA.processing.editing

Curated Location

plastid stroma (Pubmed: 23198870 19500301 20143129 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G18750.1 11 Arabidopsis thaliana 0 810 35 58 1 (0) C
AT1G11290.1 11 Arabidopsis thaliana 5E-180 735 37 58 1 (1) C
AT4G33990.1 11 Arabidopsis thaliana 3E-175 734 37 57 0 (0) M
Os05g49920.1 7 Oryza sativa 0 806 53 71 0 (0) C
Os01g10800.1 7 Oryza sativa 0 737 38 59 2 (2) C
Os09g07780.1 7 Oryza sativa 0 819 36 56 0 (0) M
GRMZM2G455587_P01 3.21 Zea mays 0 806 54 71 0 (0) C
v1_GRMZM2G455587_P01 4a53 Zea mays 0 806 54 71 0 (0) C
Zm00001eb296600_P001 agpv5 Zea mays 0 806 54 71 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(3) ATP13(3) Coatomer_E(1) DYW_deaminase(1) MRP-S27(2) PPR(15) PPR_1(15) PPR
TargetP:	Chloroplast (Class 1 C0.960; M0.081; S0.001; _0.054)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	866 aa (-cTP 814)
Molecular Weight	97.70 kDA(-cTP 91.64)
PI	8.11(-cTP 6.76)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data