PPDB

The Plant Proteome Database

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AT1G15440.1   periodic tryptophan protein 2

Lab Annot. transducin protein / WD-40 repeat protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G15440.2 11Arabidopsis thaliana090095951 (1)_
AT3G49660.1 11Arabidopsis thaliana3E-1922128470 (0)C
AT1G11160.2 11Arabidopsis thaliana2E-1821828450 (0)_
Os05g44320.1 7Oryza sativa089966790 (0)M
Os05g44320.2 7Oryza sativa077266790 (0)M
Os05g44320.3 7Oryza sativa077266790 (0)M
GRMZM2G060817_P02 3.21Zea mays089664796 (6)M
Zm00001eb293800_P002 agpv5Zea mays089664790 (0)M
GRMZM2G060817_P01 3.21Zea mays077264785 (5)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(9) Coatomer_WDAD(2) eIF2A(4) Ge1_WD40(5) Nup160(4) Utp12(1) Utp21(1)
TargetP: Cytoplasm (Class 5 C0.367; M0.202; S0.012; _0.395)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 900 aa (-cTP 843)
Molecular Weight 100.47 kDA(-cTP )
PI 5.92(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1873Detail       Total leaf [A. thaliana] Stroma wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
20733066(phosphoproteome-ABA-leaf)
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help