PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G15310.1 signal recognition particle 54 kDa subunit

Lab Annot.

SRP54
Mapman: 29.3 protein.targeting

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G48900.1 11 Arabidopsis thaliana 0 495 85 90 8 (2) _
AT5G49500.1 11 Arabidopsis thaliana 0 494 78 85 0 (0) _
AT1G48900.2 11 Arabidopsis thaliana 0 418 88 93 7 (2) _
Os01g56600.1 7 Oryza sativa 0 482 76 87 7 (7) _
Os05g43390.1 7 Oryza sativa 0 480 68 82 0 (0) _
Os11g05556.2 7 Oryza sativa 1E-58 399 30 51 18 (18) _
GRMZM2G038953_P02 3.21 Zea mays 0 482 72 83 32 (3) _
v1_GRMZM2G038953_P02 4a53 Zea mays 0 482 72 83 3 (3) _
Zm00001eb151790_P003 agpv5 Zea mays 0 482 72 83 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(1) AAA_16(1) AAA_17(1) AAA_22(1) AAA_24(1) AAA_30(1) AAA_33(1) APS_kinase(1)
TargetP:	Cytoplasm (Class 2 C0.055; M0.212; S0.070; _0.829)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	479 aa (-cTP 476)
Molecular Weight	53.01 kDA(-cTP )
PI	9.10(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data