PPDB

PPDB	The Plant Proteome Database

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AT1G15290.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

REDUCED CHLOROPLAST COVERAGE 3 (REC3)
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G15290.2 11 Arabidopsis thaliana 0 1325 99 99 0 (0) _
AT4G28080.1 11 Arabidopsis thaliana 0 1430 49 64 165 (103) _
AT1G01320.3 11 Arabidopsis thaliana 0 1430 47 63 0 (0) _
Os04g55230.1 7 Oryza sativa 0 1727 46 61 32 (32) _
Os07g23990.1 7 Oryza sativa 0 1125 50 64 36 (36) _
Os07g23990.2 7 Oryza sativa 0 997 53 66 5 (5) _
GRMZM2G318635_P01 3.21 Zea mays 0 1376 52 67 83 (74) _
GRMZM2G086030_P01 3.21 Zea mays 0 1736 43 57 41 (39) _
v1_GRMZM2G086030_P01 4a53 Zea mays 0 1736 43 57 33 (33) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CLU(1) CLU_N(1) DUF5681(1) eIF3_p135(2) PAM2(1) TPR_1(3) TPR_10(4) TPR_12(3) TPR
TargetP:	Cytoplasm (Class 2 C0.301; M0.074; S0.062; _0.909)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1608 aa (-cTP 1604)
Molecular Weight	177.63 kDA(-cTP )
PI	6.55(-cTP )

Experimental Evidence

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View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1758	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag+fosmidomycin
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data