PPDB

PPDB	The Plant Proteome Database

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AT1G15280.1 CASC3/Barentsz eIF4AIII binding protein

Lab Annot.

CASC3/Barentsz eIF4AIII binding
Mapman: 35.1.40 not assigned.no ontology.glycine rich proteins

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G15280.2 11 Arabidopsis thaliana 0 585 99 99 1 (1) _
AT1G80000.1 11 Arabidopsis thaliana 3E-172 612 51 63 0 (0) _
AT1G80000.3 11 Arabidopsis thaliana 3E-172 612 51 63 0 (0) _
Os05g45830.1 7 Oryza sativa 1E-25 416 31 44 0 (0) _
Os01g41190.1 7 Oryza sativa 9E-20 228 41 52 3 (3) _
Os01g41190.2 7 Oryza sativa 9E-20 228 41 52 1 (1) _
GRMZM2G121117_P01 3.21 Zea mays 7E-34 604 28 42 0 (0) _
v1_GRMZM2G121117_P01 4a53 Zea mays 7E-34 604 28 42 0 (0) _
GRMZM2G121117_P02 3.21 Zea mays 1E-32 605 28 42 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Btz(3)
TargetP:	Cytoplasm (Class 2 C0.163; M0.142; S0.106; _0.827)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	584 aa (-cTP 579)
Molecular Weight	63.31 kDA(-cTP )
PI	6.12(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1494	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
22060019(phosphoproteome - N-starved seedlings)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data