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PPDB	The Plant Proteome Database

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AT1G15215.1 SAWADEE HOMEODOMAIN protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G15215.2 11 Arabidopsis thaliana 2E-113 156 100 100 1 (1) _
AT1G15215.4 11 Arabidopsis thaliana 2E-113 156 100 100 0 (0) _
AT1G15215.3 11 Arabidopsis thaliana 5E-113 156 100 100 1 (1) _
Os09g17770.1 7 Oryza sativa 7E-17 163 31 47 0 (0) _
Os06g29020.1 7 Oryza sativa 7E-14 143 32 51 0 (0) _
Os06g29020.2 7 Oryza sativa 7E-14 143 32 51 0 (0) _
Zm00001eb310530_P006 agpv5 Zea mays 2E-17 160 34 45 0 (0) _
Zm00001eb310530_P005 agpv5 Zea mays 1E-16 148 34 47 0 (0) _
GRMZM5G843174_P02 3.21 Zea mays 5E-16 163 33 44 6 (6) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF5525(1) EF-hand_13(1) Homeodomain(1) SAWADEE(2) V-set_CD47(1)
TargetP:	Cytoplasm (Class 1 C0.051; M0.081; S0.030; _0.942)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	163 aa (-cTP 121)
Molecular Weight	18.36 kDA(-cTP )
PI	6.41(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1476	Detail								leaf [A. thaliana]	co-IP GST-ClpSmut stroma	clpc1 x clps (rep. 4)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data