PPDB

PPDB	The Plant Proteome Database

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AT1G15210.1 pleiotropic drug resistance 7

Lab Annot.

ABC-2 type transporter (PDR7)
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G59870.1 11 Arabidopsis thaliana 0 1469 83 91 232 (208) C
AT3G16340.1 11 Arabidopsis thaliana 0 1430 71 85 0 (0) C
AT3G16340.2 11 Arabidopsis thaliana 0 1430 70 85 0 (0) C
Os01g42410.1 7 Oryza sativa 0 1441 58 75 0 (0) M
Os01g42380.1 7 Oryza sativa 0 1461 57 75 0 (0) _
Os01g42350.1 7 Oryza sativa 0 1435 57 74 0 (0) C
GRMZM2G029506_P01 3.21 Zea mays 0 1561 62 76 1 (1) _
Zm00001eb154460_P001 agpv5 Zea mays 0 1459 61 77 0 (0) _
GRMZM2G000614_P01 3.21 Zea mays 0 1459 61 77 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(2) AAA_14(2) AAA_16(2) AAA_18(2) AAA_21(3) AAA_22(2) AAA_23(2) AAA_24(2) AAA
TargetP:	Chloroplast (Class 3 C0.642; M0.148; S0.043; _0.210)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	13 TMs
Aramemnon:	14 TMs
TAT position:
Length	1442 aa (-cTP 1421)
Molecular Weight	162.57 kDA(-cTP 160.22)
PI	8.07(-cTP 7.91)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1345	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 1)
1744	Detail								[A. thaliana]		Mep-6
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2270	Detail								seedlings [A. thaliana]	total tissue	wild-type
2271	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
16618929(PlasmaMembrane-LOPIT-callus)
17317660(Plasma Membrane proteome)
17432890(leaf total membranes)
18436743(specific to roots)
19334764(plasma membrane (cell culture))
19995723(chloroplast reference proteome)
20843791(DRM-enriched plasmamembrane)

Comparative Proteomics Data