PPDB

 The Plant Proteome Database

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AT1G15060.1   alpha/beta hydrolase family protein
Lab Annot. alpha/beta hydrolase
Mapman: 26.57* misc.alpha/beta-Hydrolase family
Curated Location plastid stroma (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G15060.3 11Arabidopsis thaliana05781001000 (0)C
AT1G15060.2 11Arabidopsis thaliana04691001000 (0)C
AT1G73750.1 11Arabidopsis thaliana1E-121304557426 (26)C
Os01g49760.1 7Oryza sativa052557740 (0)C
Os08g27050.1 7Oryza sativa053052670 (0)C
Os01g49760.3 7Oryza sativa1E-12635253700 (0)C
Zm00001eb156070_P002 agpv5Zea mays052357740 (0)C
Zm00001eb156070_P003 agpv5Zea mays052357740 (0)C
Zm00001eb156070_P004 agpv5Zea mays052357740 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Abhydrolase_1(2) Abhydrolase_3(1) Abhydrolase_5(2) Abhydrolase_6(2) DLH(2) DUF90
TargetP: Chloroplast (Class 4 C0.662; M0.401; S0.004; _0.036)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 578 aa (-cTP 530) (-lTP 457)
Molecular Weight 63.67 kDA(-cTP 58.14)(-lTP 50.25)
PI 5.52(-cTP 5.02)(-lTP 4.883)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
303Detail       leaf [A. thaliana] chloroplast stromawild-type
339Detail       leaf [A. thaliana] chloroplast stromawild-type
870Detail       leaf [A. thaliana] chloroplast stromawild-type
874Detail       leaf [A. thaliana] chloroplast stromawild-type
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1485Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1948Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1949Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1985Detail       leaf [A. thaliana] plastid wild-type
1987Detail       leaf [A. thaliana] plastid Prep1_Prep2
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2
2112Detail       leaf [A. thaliana] Stroma stromawt
2113Detail       leaf [A. thaliana] Stroma stromawt
2286Detail        [A. thaliana] Clp C1 WT
2288Detail        [A. thaliana] Clp C1 WT
2290Detail        [A. thaliana] Clp C1 TRAP
2311Detail       leaf [A. thaliana] PG plastoglobule 
2316Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 18431481(chloroplast)
19546170(mature pollen grains)
21841088(mitochondria (2DE native gel))

Comparative Proteomics Data

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