PPDB

The Plant Proteome Database

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AT1G14650.1   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein

Lab Annot. surp domain-containing protein / ubiquitin protein (SWAP)
Mapman: 27.1 RNA.processing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G14650.3 11Arabidopsis thaliana07851001000 (0)_
AT1G14650.2 11Arabidopsis thaliana078510010016 (9)_
AT1G14640.2 11Arabidopsis thaliana074881870 (0)_
Os02g14780.2 7Oryza sativa0544637320 (20)_
Os02g14780.1 7Oryza sativa0544637320 (20)_
Zm00001eb128190_P001 agpv5Zea mays082657680 (0)_
Zm00001eb128190_P002 agpv5Zea mays082657680 (0)_
Zm00001eb333220_P001 agpv5Zea mays079359690 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PRP21_like_P(1) Surp(2) Toprim_Crpt(2) ubiquitin(1)
TargetP: Cytoplasm (Class 5 C0.576; M0.050; S0.064; _0.637)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 785 aa (-cTP 757)
Molecular Weight 87.59 kDA(-cTP )
PI 5.06(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2248Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)
20813957(SUMO proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


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