PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G14340.1   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G01210.1 11Arabidopsis thaliana4E-5125544590 (0)_
AT3G01210.2 11Arabidopsis thaliana4E-5125544590 (0)_
AT4G17720.1 11Arabidopsis thaliana4E-4624138599 (9)_
Os04g54870.2 7Oryza sativa3E-7423352700 (0)_
Os04g54870.1 7Oryza sativa4E-7423352700 (0)_
Os06g02240.1 7Oryza sativa4E-4724837588 (8)_
v1_GRMZM2G114325_P01 4a53Zea mays9E-7422652720 (0)_
GRMZM2G114325_P01 3.21Zea mays9E-7422652720 (0)_
GRMZM2G114325_P02 3.21Zea mays9E-7422652720 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(1)
TargetP: Cytoplasm (Class 2 C0.123; M0.104; S0.142; _0.852)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 244 aa (-cTP 204)
Molecular Weight 26.42 kDA(-cTP )
PI 5.35(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help