PPDB

 The Plant Proteome Database

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AT1G14290.1   sphingoid base hydroxylase 2
Lab Annot.
Mapman: 11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G69640.1 11Arabidopsis thaliana2E-15025977900 (0)S
AT1G14290.2 11Arabidopsis thaliana2E-1371841001000 (0)_
AT4G12110.1 11Arabidopsis thaliana6E-1222125440 (0)_
Os06g12250.1 7Oryza sativa3E-14026070830 (0)S
Os02g51150.1 7Oryza sativa4E-13426167800 (0)S
Os02g51150.2 7Oryza sativa7E-12926166780 (0)S
v1_GRMZM2G124276_P01 4a53Zea mays3E-14126069840 (0)S
GRMZM2G124276_P01 3.21Zea mays3E-14126069840 (0)S
Zm00001eb372420_P001 agpv5Zea mays3E-14126069840 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF1673(1) FA_hydroxylase(1)
TargetP: Secreted (Class 1 C0.008; M0.027; S0.977; _0.163)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 4 TMs
TAT position:
Length 259 aa (-cTP 177)
Molecular Weight 29.83 kDA(-cTP )
PI 7.83(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help