PPDB

The Plant Proteome Database

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AT1G14210.1   Ribonuclease T2 family protein

Lab Annot.
Mapman: 27.1.19 RNA.processing.ribonucleases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G14220.1 11Arabidopsis thaliana4E-8622255680 (0)S
AT2G02990.1 11Arabidopsis thaliana1E-7522947641 (1)S
AT1G26820.1 11Arabidopsis thaliana2E-7522547630 (0)S
Os08g33710.1 7Oryza sativa2E-6522541622 (2)S
Os07g43670.1 7Oryza sativa6E-4624035470 (0)S
Os09g36680.1 7Oryza sativa5E-37203335435 (35)S
v1_GRMZM2G161274_P01 4a53Zea mays3E-6920645647 (7)S
GRMZM2G161274_P02 3.21Zea mays3E-6920645643 (3)S
Zm00001eb041390_P001 agpv5Zea mays3E-6920645640 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: JLPA(1) Ribonuclease_T2(1)
TargetP: Secreted (Class 1 C0.042; M0.017; S0.958; _0.083)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 247 aa (-cTP 235)
Molecular Weight 28.19 kDA(-cTP )
PI 5.86(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17916636(root (NaCl stress))
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help