PPDB

The Plant Proteome Database

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AT1G14000.1   VH1-interacting kinase

Lab Annot. protein kinase protein / ankyrin repeat protein
Mapman: 29.4 protein.postranslational modification; 29.4.1 protein.postranslational modification.kinase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G58760.1 11Arabidopsis thaliana3E-10140445590 (0)M
AT3G58760.5 11Arabidopsis thaliana1E-10040445590 (0)_
AT3G58760.3 11Arabidopsis thaliana1E-10040445590 (0)_
Os07g43900.1 7Oryza sativa032180904 (4)_
Os01g54480.1 7Oryza sativa9E-9339941590 (0)C
Os02g39560.1 7Oryza sativa4E-8343438550 (0)M
GRMZM2G159034_P01 3.21Zea mays040676887 (5)_
v1_GRMZM2G159034_P01 4a53Zea mays040676881 (1)_
Zm00001eb328410_P001 agpv5Zea mays040676880 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ank(1) Ank_2(2) Ank_3(1) Ank_4(2) Ank_5(1) APH(2) PK_Tyr_Ser-Thr(1) Pkinase(1) P
TargetP: Cytoplasm (Class 4 C0.406; M0.078; S0.088; _0.738)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 438 aa (-cTP 424)
Molecular Weight 49.34 kDA(-cTP )
PI 7.76(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
311Detail       leaf [A. thaliana] total leaf tissue clpr2-1:R2-his6
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
2044Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2249Detail       seedlings [A. thaliana] total tissue gfs9
2287Detail        [A. thaliana] Clp C1 WT
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

18814325(cotyledons)
19546170(mature pollen grains)
20118269(developing seeds)
19525416(leaf (wt and clpr4-1 mutant))
18686298(tonoplast - phosphoproteome (leaves))
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help