PPDB

 The Plant Proteome Database

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AT1G13950.1   eukaryotic elongation factor 5A-1
Lab Annot.
Mapman: 29.2.3 protein.synthesis.initiation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G69410.1 11Arabidopsis thaliana9E-102158879437 (20)_
AT1G26630.1 11Arabidopsis thaliana6E-951568292347 (207)_
AT1G26630.2 11Arabidopsis thaliana1E-77126849292 (87)_
Os12g32240.1 7Oryza sativa5E-102160899536 (36)_
Os07g40580.1 7Oryza sativa1E-100160889547 (47)_
Os03g55150.4 7Oryza sativa5E-99160869344 (44)_
GRMZM2G144030_P01 3.21Zea mays8E-981608493189 (123)_
v1_GRMZM2G144030_P01 4a53Zea mays8E-981608493118 (117)_
Zm00001eb326630_P002 agpv5Zea mays8E-9816084930 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: EFP_N(1) eIF-5a(1)
TargetP: Cytoplasm (Class 1 C0.111; M0.086; S0.057; _0.925)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 158 aa (-cTP 115)
Molecular Weight 17.36 kDA(-cTP )
PI 5.41(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2192Detail        [A. thaliana] total soluble P3-trap-strepII 16

* For details about the exprimental sources click here.

Published Proteomics Data

 18814325(cotyledons)
19546170(mature pollen grains)
21173025(root proteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help