PPDB

 The Plant Proteome Database

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AT1G13820.1   alpha/beta-Hydrolases superfamily protein
Lab Annot. alpha/beta-Hydrolase
Mapman: 26.57* misc.alpha/beta-Hydrolase family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G39220.1 11Arabidopsis thaliana2E-13030857740 (0)C
AT5G39220.2 11Arabidopsis thaliana8E-12230855720 (0)C
AT4G36530.2 11Arabidopsis thaliana3E-16287254344 (44)C
Os07g41080.1 7Oryza sativa3E-9832548644 (4)C
Os03g27110.1 7Oryza sativa1E-1428231450 (0)C
Os01g45960.1 7Oryza sativa1E-1227126420 (0)M
Zm00001eb108550_P001 agpv5Zea mays6E-13630962750 (0)C
v1_GRMZM2G133302_P02 4a53Zea mays6E-13630962757 (7)C
GRMZM5G898684_P02 3.21Zea mays6E-136309627512 (12)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Abhydrolase_1(2) Abhydrolase_4(1) Abhydrolase_6(1) Hydrolase_4(2) Ndr(2)
TargetP: Cytoplasm (Class 3 C0.138; M0.147; S0.084; _0.548)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 339 aa (-cTP 333)
Molecular Weight 37.96 kDA(-cTP )
PI 7.57(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

 21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help