PPDB

PPDB	The Plant Proteome Database

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AT1G13800.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G13800.2 11 Arabidopsis thaliana 0 883 100 100 0 (0) M
AT2G26790.2 11 Arabidopsis thaliana 0 768 48 65 0 (0) M
AT2G26790.1 11 Arabidopsis thaliana 0 768 48 65 0 (0) M
Os02g43080.1 7 Oryza sativa 3E-101 759 29 50 0 (0) M
Os11g43800.1 7 Oryza sativa 2E-99 758 29 50 0 (0) _
Os06g47570.1 7 Oryza sativa 1E-66 749 25 43 0 (0) C
Zm00001eb140410_P001 agpv5 Zea mays 2E-100 769 29 49 0 (0) M
Zm00001eb140410_P002 agpv5 Zea mays 2E-100 769 29 49 0 (0) M
Zm00001eb413560_P005 agpv5 Zea mays 2E-100 829 28 48 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(3) DUF3368(3) DUF440(2) GGDEF_2(1) Mic1(2) Mtf2(2) NatB_MDM20(2) PPR(18)
TargetP:	Mitochondria (Class 1 C0.049; M0.889; S0.022; _0.068)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	883 aa (-cTP 855)
Molecular Weight	100.52 kDA(-cTP )
PI	6.62(-cTP )

Experimental Evidence

Expand

* For details about the exprimental sources click here.

Published Proteomics Data

17660356(tonoplast (Brassica oleracea buds))

Comparative Proteomics Data