PPDB

The Plant Proteome Database

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AT1G13690.1   ATPase E1

Lab Annot. RNA recognition motif (RRM)-containing protein,
Mapman: 29.6 protein.folding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G61030.1 11Arabidopsis thaliana2E-168541633 (2)M
AT5G61030.2 11Arabidopsis thaliana2E-168541630 (0)M
AT3G08000.1 11Arabidopsis thaliana2E-158343650 (0)C
Os03g40310.1 7Oryza sativa9E-85165789117 (17)_
Os01g68790.2 7Oryza sativa3E-1580426121 (21)C
Os01g68790.3 7Oryza sativa3E-1580426110 (10)C
Zm00001eb219260_P001 agpv5Zea mays2E-8416575890 (0)_
v1_GRMZM2G138572_P01 4a53Zea mays2E-84165758918 (18)_
GRMZM2G138572_P01 3.21Zea mays2E-84165758912 (4)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(1)
TargetP: Cytoplasm (Class 5 C0.017; M0.255; S0.387; _0.575)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 177 aa (-cTP 109)
Molecular Weight 19.81 kDA(-cTP )
PI 4.66(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2007Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2251Detail       seedlings [A. thaliana] total tissue wild-type
2321Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21173025(root proteome)

Comparative Proteomics Data


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