PPDB

PPDB	The Plant Proteome Database

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AT1G13630.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G13630.5 11 Arabidopsis thaliana 0 768 97 97 0 (0) C
AT1G13630.2 11 Arabidopsis thaliana 0 776 96 96 0 (0) C
AT1G13630.4 11 Arabidopsis thaliana 0 781 95 95 0 (0) C
Os10g33874.1 7 Oryza sativa 8E-156 686 40 60 0 (0) M
Os03g06910.1 7 Oryza sativa 4E-78 498 30 52 0 (0) M
Os03g40020.1 7 Oryza sativa 2E-69 538 29 49 6 (6) C
Zm00001eb045730_P003 agpv5 Zea mays 3E-165 680 40 60 0 (0) M
Zm00001eb045730_P001 agpv5 Zea mays 3E-165 680 40 60 0 (0) M
Zm00001eb045730_P005 agpv5 Zea mays 3E-165 680 40 60 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Clathrin(3) DUF3368(2) MRP-S27(3) Mtf2(3) PPR(17) PPR_1(16) PPR_2(14) PPR_3(11)
TargetP:	Cytoplasm (Class 2 C0.064; M0.194; S0.089; _0.945)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	806 aa (-cTP 783)
Molecular Weight	91.20 kDA(-cTP )
PI	7.06(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data