PPDB

The Plant Proteome Database

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AT1G13570.1   F-box/RNI-like superfamily protein

Lab Annot. F-box/RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G13570.3 11Arabidopsis thaliana04161001000 (0)_
AT1G13570.2 11Arabidopsis thaliana02671001000 (0)_
AT5G56370.1 11Arabidopsis thaliana2E-1944725420 (0)_
Os02g33400.1 7Oryza sativa3E-3223836520 (0)_
Os08g35870.1 7Oryza sativa3E-2642326420 (0)_
Os08g35870.2 7Oryza sativa7E-2642326420 (0)_
GRMZM2G133021_P01 3.21Zea mays2E-4042729510 (0)_
v1_GRMZM2G133021_P01 4a53Zea mays2E-4042729510 (0)_
Zm00001eb288120_P001 agpv5Zea mays2E-4042729510 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) FBD(2) LRR_2(3) LRR_8(4)
TargetP: Cytoplasm (Class 2 C0.136; M0.133; S0.091; _0.742)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 416 aa (-cTP 360)
Molecular Weight 47.60 kDA(-cTP )
PI 4.90(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help