PPDB

PPDB	The Plant Proteome Database

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AT1G13410.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G02750.1 11 Arabidopsis thaliana 3E-115 420 42 60 0 (0) M
AT3G29230.1 11 Arabidopsis thaliana 1E-114 422 40 62 6 (6) M
AT5G56310.1 11 Arabidopsis thaliana 3E-106 368 43 65 0 (0) M
Os12g38880.1 7 Oryza sativa 6E-116 423 40 61 0 (0) S
Os06g03570.2 7 Oryza sativa 8E-112 371 44 65 0 (0) M
Os09g15800.1 7 Oryza sativa 9E-112 420 41 59 0 (0) M
Zm00001eb037450_P001 agpv5 Zea mays 1E-112 421 40 61 0 (0) M
GRMZM2G077320_P01 3.21 Zea mays 9E-112 421 40 61 0 (0) C
v1_GRMZM2G077320_P01 4a53 Zea mays 9E-112 421 40 61 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PPR(11) PPR_1(10) PPR_2(9) PPR_3(6) PPR_long(3) PYRIN(1) TPR_19(2)
TargetP:	Cytoplasm (Class 4 C0.032; M0.236; S0.341; _0.683)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	474 aa (-cTP 423)
Molecular Weight	53.17 kDA(-cTP )
PI	5.39(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data