PPDB

 The Plant Proteome Database

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AT1G13260.1   related to ABI3/VP1 1
Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
TAIR curated location: nucleus15610358
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G25730.1 11Arabidopsis thaliana3E-16734670790 (0)C
AT1G25560.1 11Arabidopsis thaliana3E-14437361690 (0)C
AT1G68840.1 11Arabidopsis thaliana9E-14436263750 (0)C
Os01g49830.1 7Oryza sativa3E-10936953620 (0)_
Os05g47650.1 7Oryza sativa6E-10429058660 (0)_
Os01g04750.1 7Oryza sativa3E-9227258690 (0)_
v1_GRMZM2G169654_P01 4a53Zea mays2E-10731157661 (1)_
Zm00001eb156040_P001 agpv5Zea mays2E-10731157660 (0)_
GRMZM2G169654_P01 3.21Zea mays2E-10731157660 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AP2(1) B3(2) DUF313(3)
TargetP: Chloroplast (Class 5 C0.755; M0.047; S0.108; _0.594)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 344 aa (-cTP 293)
Molecular Weight 38.60 kDA(-cTP 33.43)
PI 9.39(-cTP 9.76)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 19334764(plasma membrane (cell culture))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help